STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNISRPNN interacting serine and arginine rich protein. (449 aa)    
Predicted Functional Partners:
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
  
 0.932
PRPF39
Pre-mRNA processing factor 39.
   
  
 0.882
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.826
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.750
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.744
ACTL6A
Actin like 6A; Belongs to the actin family.
    
 0.722
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
   
 
 0.717
MAN2A1
Alpha-mannosidase.
      
 0.716
SLC7A2
Solute carrier family 7 member 2.
      
 0.716
PBRM1
Polybromo 1.
    
 0.703
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.