Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PNISRPNN interacting serine and arginine rich protein. (449 aa)    
Predicted Functional Partners:
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
  
 0.983
NKTR
Natural killer cell triggering receptor.
   
 0.911
PRPF39
Pre-mRNA processing factor 39.
   
  
 0.896
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.890
TTC14
Tetratricopeptide repeat domain 14.
   
  0.831
SRRM3
Serine/arginine repetitive matrix 3.
   
 0.781
ANKRD16
Ankyrin repeat domain 16.
   
 0.776
U3IMW5_ANAPP
Uncharacterized protein.
   
 0.747
SON
Uncharacterized protein.
   
 0.747
DDX17
DEAD-box helicase 17; Belongs to the DEAD box helicase family.
   
 0.722
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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