STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPHN1Oligophrenin 1. (974 aa)    
Predicted Functional Partners:
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
      
 0.748
U3IIV7_ANAPP
Uncharacterized protein.
      
 0.636
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
      
 0.558
MFSD12
Uncharacterized protein.
      
 0.550
TMEM132E
Transmembrane protein 132E.
      
 0.548
CNTN3
Contactin 3.
      
 0.545
GRK3
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
      
 0.545
PSTPIP2
Proline-serine-threonine phosphatase interacting protein 2.
    
 
 0.545
GLRA4
Glycine receptor alpha 4; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.544
ZC4H2
Zinc finger C4H2-type containing.
      
 0.538
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.