Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ASPHAspartate beta-hydroxylase. (851 aa)    
Predicted Functional Partners:
ENSAPLP00000022768
Asp-B-Hydro_N domain-containing protein.
   
 
 0.990
CASQ2
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 
 0.960
RYR3
Ryanodine receptor 3.
   
 
 0.917
RYR2
Ryanodine receptor 2.
   
 
 0.917
FKBP1B
Peptidylprolyl isomerase.
     
 0.579
FKBP1A
Peptidylprolyl isomerase.
     
 0.579
PSPH
Phosphoserine phosphatase.
      
 0.577
ANLN
Anillin actin binding protein.
    
   0.559
C1QTNF12
C1q and TNF related 12.
      
 0.548
CCDC85C
Coiled-coil domain containing 85C.
      
 0.548
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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