STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPHAspartate beta-hydroxylase. (851 aa)    
Predicted Functional Partners:
ENSAPLP00000022768
Asp-B-Hydro_N domain-containing protein.
   
 0.828
DDIAS
Rep_fac-A_C domain-containing protein.
      
 0.625
CDV3
CDV3 homolog.
      
 0.609
SRI
Sorcin.
      
 0.586
ASPG
Asparaginase.
      
 0.586
RYR3
Ryanodine receptor 3.
   
 
 0.559
RYR2
Ryanodine receptor 2.
   
 
 0.559
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
      
 0.555
CASQ2
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.551
TNIP1
TNFAIP3 interacting protein 1.
      
 0.539
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.