STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMBR1Limb development membrane protein 1; Belongs to the LIMR family. (488 aa)    
Predicted Functional Partners:
SEC24A
Uncharacterized protein.
   
 
 0.621
KCNK10
Potassium two pore domain channel subfamily K member 10; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.620
SH2D3C
SH2 domain containing 3C.
      
 0.610
FBXL20
F-box and leucine rich repeat protein 20.
   
  
 0.601
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 
 0.477
SLC16A1
Solute carrier family 16 member 1.
    
 
 0.473
EPHB2
EPH receptor B2.
    
 
 0.459
PDE3A
Phosphodiesterase.
   
 
 0.456
PLIN1
Perilipin 1.
    
 
 0.455
TCF12
BHLH domain-containing protein.
      
 0.450
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.