Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMBR1Limb development membrane protein 1; Belongs to the LIMR family. (488 aa)    
Predicted Functional Partners:
EPRS1
Glutamyl-prolyl-tRNA synthetase.
    
 
 0.634
WNT8B
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.547
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
 
 0.529
SHH
Sonic hedgehog signaling molecule.
      
 0.512
LUM
Lumican.
      
 0.499
NR2F2
NR LBD domain-containing protein.
    
 
 0.494
IGF1R
Tyrosine-protein kinase receptor.
    
 
 0.485
SLC35F3
Solute carrier family 35 member F3.
      
 0.485
RNF32
Ring finger protein 32.
    
 
 0.483
NOM1
Nucleolar protein with MIF4G domain 1.
      
 0.476
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.