STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGAPT cell activation RhoGTPase activating protein. (695 aa)    
Predicted Functional Partners:
SASH3
SAM and SH3 domain containing 3.
   
  
 0.698
THEMIS2
Thymocyte selection associated family member 2.
   
  
 0.610
RNF144B
RBR-type E3 ubiquitin transferase.
      
 0.586
RIPOR3
RIPOR family member 3.
   
  
 0.510
CDC42
Cell division cycle 42.
   
 0.496
KLHL4
Kelch like family member 4.
      
 0.479
CAPN8
Calpain 8; Belongs to the peptidase C2 family.
   
  
 0.479
DGKI
Diacylglycerol kinase.
      
 0.477
PIK3AP1
Phosphoinositide-3-kinase adaptor protein 1.
   
  
 0.463
RHOA
Ras homolog family member A.
   
 0.463
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.