STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEPDC7DEP domain containing 7. (518 aa)    
Predicted Functional Partners:
FAM177A1
Family with sequence similarity 177 member A1.
      
 0.749
ENSAPLP00000023419
Uncharacterized protein.
 
      0.726
FAM135B
Family with sequence similarity 135 member B.
      
 0.611
SLC18A2
Solute carrier family 18 member A2.
      
 0.610
U3HZ33_ANAPP
Olfactory receptor.
      
 0.586
SLC6A2
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.586
ADAMTS2
ADAM metallopeptidase with thrombospondin type 1 motif 2.
      
 0.558
SLC25A4
Solute carrier family 25 member 4; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.482
SLC13A5
Uncharacterized protein.
   
  
 0.481
SLC13A3
Solute carrier family 13 member 3.
   
  
 0.481
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.