STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEMIN5Gem nuclear organelle associated protein 5. (1532 aa)    
Predicted Functional Partners:
DDX20
DEAD-box helicase 20; Belongs to the DEAD box helicase family.
   
 0.999
GEMIN8
Gem nuclear organelle associated protein 8.
    
 0.998
GEMIN4
Gem nuclear organelle associated protein 4.
   
 0.997
GEMIN2
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
    
 0.994
SMN1
Tudor domain-containing protein.
   
 0.980
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
 0.957
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.954
STRAP
Serine/threonine kinase receptor associated protein.
    
 0.949
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.936
ENSAPLP00000019022
Uncharacterized protein.
     
 0.921
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: medium (72%) [HD]