U3IGU3_ANAPP protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

U3IGU3_ANAPP

B30.2/SPRY domain-containing protein. (185 aa)

Predicted Functional Partners:

ENSAPLP00000029980

0.900

CARD9

0.868

CH25H

0.594

TRIM32

0.560

TRIM66

0.548

TRIM23

0.487

TRIM37

0.444

UBE2D2

0.440

UBE2D3

0.440

TRIM24

0.409

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CARD9	ENSAPLP00000029980	ENSAPLP00000007223	ENSAPLP00000029980	Caspase recruitment domain family member 9.	Uncharacterized protein.	0.868
CARD9	U3IGU3_ANAPP	ENSAPLP00000007223	ENSAPLP00000006465	Caspase recruitment domain family member 9.	B30.2/SPRY domain-containing protein.	0.868
CH25H	ENSAPLP00000029980	ENSAPLP00000001595	ENSAPLP00000029980	Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.594
CH25H	U3IGU3_ANAPP	ENSAPLP00000001595	ENSAPLP00000006465	Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.	B30.2/SPRY domain-containing protein.	0.594
ENSAPLP00000029980	CARD9	ENSAPLP00000029980	ENSAPLP00000007223	Uncharacterized protein.	Caspase recruitment domain family member 9.	0.868
ENSAPLP00000029980	CH25H	ENSAPLP00000029980	ENSAPLP00000001595	Uncharacterized protein.	Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.	0.594
ENSAPLP00000029980	TRIM23	ENSAPLP00000029980	ENSAPLP00000008768	Uncharacterized protein.	Tripartite motif containing 23.	0.487
ENSAPLP00000029980	TRIM24	ENSAPLP00000029980	ENSAPLP00000003258	Uncharacterized protein.	Tripartite motif containing 24.	0.409
ENSAPLP00000029980	TRIM32	ENSAPLP00000029980	ENSAPLP00000027536	Uncharacterized protein.	Tripartite motif containing 32.	0.560
ENSAPLP00000029980	TRIM37	ENSAPLP00000029980	ENSAPLP00000026944	Uncharacterized protein.	Tripartite motif containing 37.	0.444
ENSAPLP00000029980	TRIM66	ENSAPLP00000029980	ENSAPLP00000003706	Uncharacterized protein.	Tripartite motif containing 66.	0.548
ENSAPLP00000029980	U3IGU3_ANAPP	ENSAPLP00000029980	ENSAPLP00000006465	Uncharacterized protein.	B30.2/SPRY domain-containing protein.	0.900
ENSAPLP00000029980	UBE2D2	ENSAPLP00000029980	ENSAPLP00000025583	Uncharacterized protein.	Ubiquitin conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.	0.440
ENSAPLP00000029980	UBE2D3	ENSAPLP00000029980	ENSAPLP00000031333	Uncharacterized protein.	Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.	0.440
TRIM23	ENSAPLP00000029980	ENSAPLP00000008768	ENSAPLP00000029980	Tripartite motif containing 23.	Uncharacterized protein.	0.487
TRIM23	TRIM32	ENSAPLP00000008768	ENSAPLP00000027536	Tripartite motif containing 23.	Tripartite motif containing 32.	0.494
TRIM23	TRIM37	ENSAPLP00000008768	ENSAPLP00000026944	Tripartite motif containing 23.	Tripartite motif containing 37.	0.519
TRIM23	U3IGU3_ANAPP	ENSAPLP00000008768	ENSAPLP00000006465	Tripartite motif containing 23.	B30.2/SPRY domain-containing protein.	0.487
TRIM23	UBE2D2	ENSAPLP00000008768	ENSAPLP00000025583	Tripartite motif containing 23.	Ubiquitin conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.	0.626
TRIM23	UBE2D3	ENSAPLP00000008768	ENSAPLP00000031333	Tripartite motif containing 23.	Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.	0.626