Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MIGA2Mitoguardin 2. (590 aa)    
Predicted Functional Partners:
MIGA1
Mitoguardin 1.
    
  0.952
VAPB
VAMP associated protein B and C.
    
 
 0.722
U3IHQ0_ANAPP
Uncharacterized protein.
 
    
 0.641
VAPA
VAMP associated protein A.
    
 
 0.623
ENSAPLP00000024121
DAO domain-containing protein.
   
  
 0.589
RPUSD4
RNA pseudouridine synthase D4.
   
  
 0.586
PTPA
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
      
 0.577
JCHAIN
Joining chain of multimeric IgA and IgM.
      
 0.577
ARPC4
Actin related protein 2/3 complex subunit 4.
      
 0.561
VPS13D
Vacuolar protein sorting 13 homolog D.
      
 0.551
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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