STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)    
Predicted Functional Partners:
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.999
TRAPPC2L
Trafficking protein particle complex 2 like.
   
 0.999
TRAPPC10
Foie-gras_1 domain-containing protein.
    
 0.998
TRAPPC5
Trafficking protein particle complex 5.
   
 0.998
TRAPPC2B
Trafficking protein particle complex 2B.
    
 0.996
TRAPPC12
Trafficking protein particle complex 12.
    
 0.994
TRAPPC8
Trafficking protein particle complex 8.
    
 0.987
TRAPPC11
Trafficking protein particle complex 11.
    
 0.981
TRAPPC9
Trafficking protein particle complex 9.
   
 0.978
TRAPPC3L
Trafficking protein particle complex 3 like.
   
 0.971
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.