STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IGX5_ANAPPPPR_long domain-containing protein. (874 aa)    
Predicted Functional Partners:
FASTKD2
FAST kinase domains 2.
   
 
 0.912
MTERF3
Mitochondrial transcription termination factor 3.
   
 
 0.882
DDX28
DEAD-box helicase 28.
   
 
 0.846
TUBGCP5
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
 0.741
TUBGCP4
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
 0.736
TUBD1
Tubulin delta 1; Belongs to the tubulin family.
   
 0.694
NEDD1
WD_REPEATS_REGION domain-containing protein.
    
 0.677
TRUB2
TruB pseudouridine synthase family member 2.
   
 
 0.676
MRM1
Mitochondrial rRNA methyltransferase 1.
    
 
 0.649
MRPL51
Mitochondrial ribosomal protein L51.
   
   0.646
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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