FAM98B protein (Anas platyrhynchos) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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[Homology]

Score

FAM98B

Family with sequence similarity 98 member B. (411 aa)

Predicted Functional Partners:

RTCB

0.926

DDX1

0.896

RTRAF

0.890

C2orf49

0.860

U3IUD0_ANAPP

0.658

HNRNPDL

0.654

GNB5

0.610

DDX17

0.575

ENSAPLP00000021740

0.566

ZBTB8OS

0.555

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2orf49	DDX1	ENSAPLP00000023474	ENSAPLP00000010949	Chromosome 2 open reading frame 49.	DEAD-box helicase 1.	0.892
C2orf49	FAM98B	ENSAPLP00000023474	ENSAPLP00000006500	Chromosome 2 open reading frame 49.	Family with sequence similarity 98 member B.	0.860
C2orf49	RTCB	ENSAPLP00000023474	ENSAPLP00000007872	Chromosome 2 open reading frame 49.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.910
C2orf49	RTRAF	ENSAPLP00000023474	ENSAPLP00000015931	Chromosome 2 open reading frame 49.	RNA transcription, translation and transport factor.	0.897
C2orf49	ZBTB8OS	ENSAPLP00000023474	ENSAPLP00000011587	Chromosome 2 open reading frame 49.	Zinc finger and BTB domain containing 8 opposite strand.	0.647
DDX1	C2orf49	ENSAPLP00000010949	ENSAPLP00000023474	DEAD-box helicase 1.	Chromosome 2 open reading frame 49.	0.892
DDX1	FAM98B	ENSAPLP00000010949	ENSAPLP00000006500	DEAD-box helicase 1.	Family with sequence similarity 98 member B.	0.896
DDX1	RTCB	ENSAPLP00000010949	ENSAPLP00000007872	DEAD-box helicase 1.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.958
DDX1	RTRAF	ENSAPLP00000010949	ENSAPLP00000015931	DEAD-box helicase 1.	RNA transcription, translation and transport factor.	0.971
DDX1	ZBTB8OS	ENSAPLP00000010949	ENSAPLP00000011587	DEAD-box helicase 1.	Zinc finger and BTB domain containing 8 opposite strand.	0.789
DDX17	FAM98B	ENSAPLP00000022718	ENSAPLP00000006500	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	Family with sequence similarity 98 member B.	0.575
DDX17	HNRNPDL	ENSAPLP00000022718	ENSAPLP00000011553	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	Heterogeneous nuclear ribonucleoprotein D like.	0.418
DDX17	RTCB	ENSAPLP00000022718	ENSAPLP00000007872	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.406
DDX17	RTRAF	ENSAPLP00000022718	ENSAPLP00000015931	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	RNA transcription, translation and transport factor.	0.534
ENSAPLP00000021740	FAM98B	ENSAPLP00000021740	ENSAPLP00000006500	TPR_REGION domain-containing protein.	Family with sequence similarity 98 member B.	0.566
ENSAPLP00000021740	U3IUD0_ANAPP	ENSAPLP00000021740	ENSAPLP00000010853	TPR_REGION domain-containing protein.	JmjC domain-containing protein.	0.928
FAM98B	C2orf49	ENSAPLP00000006500	ENSAPLP00000023474	Family with sequence similarity 98 member B.	Chromosome 2 open reading frame 49.	0.860
FAM98B	DDX1	ENSAPLP00000006500	ENSAPLP00000010949	Family with sequence similarity 98 member B.	DEAD-box helicase 1.	0.896
FAM98B	DDX17	ENSAPLP00000006500	ENSAPLP00000022718	Family with sequence similarity 98 member B.	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	0.575
FAM98B	ENSAPLP00000021740	ENSAPLP00000006500	ENSAPLP00000021740	Family with sequence similarity 98 member B.	TPR_REGION domain-containing protein.	0.566