STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPOLGPoly(A) polymerase gamma. (234 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
   
 0.969
YTHDC1
YTH domain containing 1.
   
 0.967
ZC3H3
Zinc finger CCCH-type containing 3.
    
 0.966
RBM26
RNA binding motif protein 26.
   
 
 0.956
U3IP57_ANAPP
Uncharacterized protein.
   
 
 0.953
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
  
  
0.944
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.929
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.927
RBBP6
RB binding protein 6, ubiquitin ligase.
   
 0.922
WDR33
WD_REPEATS_REGION domain-containing protein.
   
 0.917
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.