STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPOLGPoly(A) polymerase gamma. (234 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.948
WDR33
WD_REPEATS_REGION domain-containing protein.
   
 0.946
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.925
CSTF2
Cleavage stimulation factor subunit 2.
    
 0.919
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
   
 0.899
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 
 0.864
CPSF3
Uncharacterized protein.
   
 0.854
CPSF4L
Cleavage and polyadenylation specific factor 4 like.
    
 0.854
ENSAPLP00000023486
Lactamase_B domain-containing protein.
   
 0.854
CPSF4
Cleavage and polyadenylation specific factor 4.
    
 0.854
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.