Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMO2LIM domain only 2. (338 aa)    
Predicted Functional Partners:
TAL2
TAL bHLH transcription factor 2.
   
 0.973
LDB1
LIM domain binding 1.
    
 0.953
LDB2
LIM domain binding 2.
    
 0.938
POLR2D
RPOL4c domain-containing protein.
    
   0.784
POLR2C
RNA polymerase II subunit C.
    
   0.778
RECQL5
RecQ like helicase 5.
   
   0.761
GATA3
GATA binding protein 3.
    
 0.758
ENSAPLP00000023558
Uncharacterized protein.
    
 0.756
GATA2
Uncharacterized protein.
    
 0.756
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
    
   0.724
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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