STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO2LIM domain only 2. (338 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.973
TAL2
TAL bHLH transcription factor 2.
   
 0.967
LDB2
LIM domain binding 2.
    
 0.852
ENSAPLP00000023558
Uncharacterized protein.
    
 0.836
GATA2
Uncharacterized protein.
    
 0.836
GATA3
GATA binding protein 3.
    
 0.797
RUNX1
Runt-related transcription factor.
     
 0.790
CBFB
Core-binding factor subunit beta.
    
 0.692
MYB
MYB proto-oncogene, transcription factor.
     
 0.632
GATA6
GATA binding protein 6.
    
 0.627
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.