STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGAP1RAB GTPase activating protein 1. (1069 aa)    
Predicted Functional Partners:
RC3H2
Ring finger and CCCH-type domains 2.
   
  
 0.753
RABGEF1
Uncharacterized protein.
   
  0.612
AK8
Uncharacterized protein; Belongs to the adenylate kinase family.
      
 0.602
ATAD1
ATPase family AAA domain containing 1; Belongs to the AAA ATPase family.
      
 0.602
RAB41
RAB41, member RAS oncogene family.
    
 0.588
RAB6A
RAB6A, member RAS oncogene family.
    
 0.588
GOLGA1
Golgin A1.
    
 
 0.558
CHST10
Carbohydrate sulfotransferase.
      
 0.551
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1.
      
 0.548
RAB36
RAB36, member RAS oncogene family.
    
 0.484
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.