STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUNX1Runt-related transcription factor. (504 aa)    
Predicted Functional Partners:
CBFB
Core-binding factor subunit beta.
    
 0.977
PTPN11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 
 0.926
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.896
SOX9
SRY-box transcription factor 9.
   
 0.795
LMO2
LIM domain only 2.
     
 0.790
SIN3A
SIN3 transcription regulator family member A.
    
 0.762
BMP2
Bone morphogenetic protein 2.
     
 0.756
ENSAPLP00000027063
Osteocalcin; Binds strongly to apatite and calcium.
    
 0.720
EP300
E1A binding protein p300.
    
 0.714
ENSAPLP00000023558
Uncharacterized protein.
    
 0.713
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.