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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTRF1LMitochondrial translational release factor 1 like. (304 aa)    
Predicted Functional Partners:
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
  
 
 0.798
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
 
 
 0.790
HEMK1
HemK methyltransferase family member 1.
  
 
 0.783
MRPL13
Mitochondrial ribosomal protein L13.
 
 
 0.779
MRPS7
Mitochondrial ribosomal protein S7.
  
 
 0.766
MRPS11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
 
 
 0.758
YARS1
Tyrosine--tRNA ligase.
  
  
 0.756
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.756
MRRF
Mitochondrial ribosome recycling factor.
  
 
 0.745
MRPS31
Mitochondrial ribosomal protein S31.
   
 
 0.743
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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