Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HCFC2Host cell factor C2. (807 aa)    
Predicted Functional Partners:
WDR5B
WD repeat domain 5B.
   
 0.991
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 0.990
MCRS1
Microspherule protein 1.
    
 0.988
KANSL3
KAT8 regulatory NSL complex subunit 3.
   
 0.983
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.983
PHF20
PHD finger protein 20.
    
 0.979
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.971
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
   
 0.970
KANSL1
KAT8 regulatory NSL complex subunit 1.
   
 0.970
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.968
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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