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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC32A1Solute carrier family 32 member 1. (521 aa)    
Predicted Functional Partners:
RIMS2
C2 domain-containing protein.
   
 
 0.903
ENSAPLP00000029757
Uncharacterized protein.
   
 
 0.903
GAD1
Glutamate decarboxylase 1.
   
 
 0.783
GAD2
Glutamate decarboxylase 2.
   
 
 0.779
SLC17A6
Solute carrier family 17 member 6.
   
  
 0.758
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.686
SLC6A5
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.658
SYT2
Synaptotagmin 2.
   
 
 0.595
SYT1
Synaptotagmin 1.
   
 
 0.595
SLC6A9
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.594
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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