close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETD5SET domain containing 5. (1483 aa)    
Predicted Functional Partners:
THUMPD3
THUMP domain containing 3.
 
   
 0.925
MOSMO
Modulator of smoothened.
     
 0.748
FANCM
FA complementation group M.
    
 0.710
ZCCHC14
Zinc finger CCHC-type containing 14.
   
 
 0.620
AGAP1
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1.
      
 0.611
MKRN2
Makorin ring finger protein 2.
      
 0.611
SLC25A21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.604
KLHL18
Kelch like family member 18.
    
 
 0.600
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
   
 
 0.547
USP42
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.529
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.