Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM184BFamily with sequence similarity 184 member B. (782 aa)    
Predicted Functional Partners:
NCAPG
Non-SMC condensin I complex subunit G.
      
 0.871
HSDL2
Hydroxysteroid dehydrogenase like 2.
   
 0.596
FAM13A
Family with sequence similarity 13 member A.
      
 0.585
FAM13A-2
Rho-GAP domain-containing protein.
      
 0.585
PACRGL
Parkin coregulated like.
    
 
 0.548
PACRG
Parkin coregulated.
    
 
 0.548
NWD2
NACHT and WD repeat domain containing 2.
    
 0.539
UBXN2B
UBX domain protein 2B.
     
 0.481
ASPH
Aspartate beta-hydroxylase.
      
 0.480
SPTY2D1
SPT2 chromatin protein domain containing 1.
    
 0.480
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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