Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PAPLNPapilin, proteoglycan like sulfated glycoprotein. (1125 aa)    
Predicted Functional Partners:
PRPF3
Pre-mRNA processing factor 3.
      
 0.617
ENSAPLP00000023001
Uncharacterized protein.
      
 0.592
THSD1
Thrombospondin type 1 domain containing 1.
      
 0.550
U3J812_ANAPP
Uncharacterized protein.
    
 
 0.550
FAM149A
Family with sequence similarity 149 member A.
      
 0.545
ENSAPLP00000030221
WH2 domain-containing protein.
      
 0.544
MB
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
    
 0.531
AOPEP
Aminopeptidase O (putative).
      
 0.494
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
      
 0.485
NGB
Neuroglobin; Belongs to the globin family.
    
 0.452
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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