Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RAB26RAB26, member RAS oncogene family. (205 aa)    
Predicted Functional Partners:
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.826
TSR1
TSR1 ribosome maturation factor.
      
 0.756
ENSAPLP00000016646
RabGGT_insert domain-containing protein.
    
 0.723
CHM
Uncharacterized protein.
    
 0.712
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
  0.680
ZMYND11
Zinc finger MYND-type containing 11.
      
 0.551
ENSAPLP00000031977
Rab-GAP TBC domain-containing protein.
      
 0.546
AGFG1
ArfGAP with FG repeats 1.
      
 0.485
TBC1D5
TBC1 domain family member 5.
      
 0.475
RAB1A
RAB1A, member RAS oncogene family.
     
 0.440
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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