Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SIDT1SID1 transmembrane family member 1. (827 aa)    
Predicted Functional Partners:
SSRP1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
 
  
 0.713
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
 0.663
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.660
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.656
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.653
POLR2C
RNA polymerase II subunit C.
    
 0.645
POLR2F
RNA polymerase II subunit F.
    
 0.645
POLR2K
RNA polymerase II subunit K.
    
 0.645
POLR2L
RNA polymerase II subunit L.
    
 0.645
POLR2E
RNA polymerase II subunit E.
    
 0.645
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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