STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDL3Rhomboid like 3. (495 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.772
ENSAPLP00000016618
WD_REPEATS_REGION domain-containing protein.
   
 0.668
WDR90
Uncharacterized protein.
   
 0.668
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
  
 0.643
UBAC2
UBA domain containing 2.
   
  
 0.633
LRGUK
Uncharacterized protein.
  
 0.633
RBP5
Retinol binding protein 5.
   
  
 0.613
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.563
TOX3
TOX high mobility group box family member 3.
   
 0.562
EGFL6
EGF like domain multiple 6.
    
 0.552
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.