Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRR14LTantalus domain-containing protein. (458 aa)    
Predicted Functional Partners:
TRAPPC10
Foie-gras_1 domain-containing protein.
     
 0.573
U3IP57_ANAPP
Uncharacterized protein.
      
 0.547
SFXN4
Sideroflexin 4.
      
 0.544
COBLL1
Cordon-bleu WH2 repeat protein like 1.
  
 
  0.487
LBR
Lamin B receptor.
      
 0.446
KLHL17
Kelch like family member 17.
      
 0.440
U3IYH4_ANAPP
Uncharacterized protein.
  
   
 0.429
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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