STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1044 aa)    
Predicted Functional Partners:
FANCD2
Uncharacterized protein.
    
 0.992
MLH1
MutL homolog 1.
   
 0.977
PMS2
PMS1 homolog 2, mismatch repair system component.
   
 0.963
FANCM
FA complementation group M.
    
 0.952
FANCI
FA complementation group I.
    
 0.814
DCLRE1A
DNA cross-link repair 1A.
    
 0.814
SLX4
SLX4 structure-specific endonuclease subunit.
   
 
 0.790
FANCB
FA complementation group B.
     
 0.775
ENSAPLP00000017886
Fanconi_A_N domain-containing protein.
     
 0.746
ENSAPLP00000025361
Fanconi_A_N domain-containing protein.
     
 0.746
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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