STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX6DEAD-box helicase 6; Belongs to the DEAD box helicase family. (483 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA decapping 3.
   
 0.997
DCP2
Decapping mRNA 2.
   
 0.991
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.988
DCP1A
Decapping mRNA 1A.
   
 0.982
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 0.978
EDC4
Enhancer of mRNA decapping 4.
    
 0.975
DCP1B
Decapping mRNA 1B.
   
 0.974
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.962
YJEFN3
YjeF N-terminal domain-containing protein.
   
 0.951
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
 0.948
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.