STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPSLCalcyphosine like. (208 aa)    
Predicted Functional Partners:
LMBRD2
LMBR1 domain containing 2.
 
 
  
 0.800
DEPDC1B
DEP domain containing 1B.
   
 
 0.753
JAKMIP2
Janus kinase and microtubule interacting protein 2.
      
 0.706
RIT2
Ras like without CAAX 2.
   
 0.666
RAI2
Retinoic acid induced 2.
      
 0.635
PGM5
Phosphoglucomutase 5.
     
 0.616
LYRM7
LYR motif containing 7; Belongs to the complex I LYR family.
      
 0.612
CDC42SE2
CDC42 small effector 2.
     
 0.612
SCML2
Scm polycomb group protein like 2.
      
 0.612
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
      
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.