Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPSLCalcyphosine like. (208 aa)    
Predicted Functional Partners:
LMBRD2
LMBR1 domain containing 2.
 
 
  
 0.784
DLGAP5
DLG associated protein 5.
    
 
 0.689
RAD1
RAD1 checkpoint DNA exonuclease.
    
 
 0.617
ZC2HC1B
Uncharacterized protein.
    
   0.599
PRTG
Protogenin.
    
 
 0.582
FAM214A
Family with sequence similarity 214 member A.
      
 0.547
RSL24D1
Ribosomal L24 domain containing 1.
      
 0.547
DEPDC1B
DEP domain containing 1B.
   
 
 0.545
RAI2
Retinoic acid induced 2.
      
 0.544
SPP2
Secreted phosphoprotein 2.
      
 0.542
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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