STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEST1Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (756 aa)    
Predicted Functional Partners:
RPE65
Retinoid isomerohydrolase RPE65.
      
 0.831
PDE6B
Phosphodiesterase.
   
  
 0.633
RLBP1
Retinaldehyde binding protein 1.
   
  
 0.588
SLC16A8
Solute carrier family 16 member 8.
      
 0.586
PMEL
Premelanosome protein.
      
 0.586
IMPG2
Interphotoreceptor matrix proteoglycan 2.
      
 0.551
RRH
Retinal pigment epithelium-derived rhodopsin homolog; Belongs to the G-protein coupled receptor 1 family.
      
 0.550
KCNJ13
Uncharacterized protein.
      
 0.521
LRRC8A
Leucine rich repeat containing 8 VRAC subunit A.
      
 0.515
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
      
 0.514
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.