PLAGL1 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PLAGL1

PLAG1 like zinc finger 1. (774 aa)

Predicted Functional Partners:

GHSR

0.640

CDX1

0.639

EIF2AK3

0.636

TCF7

0.614

PHACTR2

0.589

SLITRK6

0.565

HTT

0.553

PLOD1

0.547

EGF

0.544

CHCHD7

0.527

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDX1	EGF	ENSAPLP00000031465	ENSAPLP00000011666	Homeobox domain-containing protein.	Pro-epidermal growth factor; EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6.	0.704
CDX1	EIF2AK3	ENSAPLP00000031465	ENSAPLP00000015386	Homeobox domain-containing protein.	Eukaryotic translation initiation factor 2 alpha kinase 3.	0.653
CDX1	GHSR	ENSAPLP00000031465	ENSAPLP00000011813	Homeobox domain-containing protein.	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	0.548
CDX1	PLAGL1	ENSAPLP00000031465	ENSAPLP00000006990	Homeobox domain-containing protein.	PLAG1 like zinc finger 1.	0.639
CDX1	PLOD1	ENSAPLP00000031465	ENSAPLP00000011167	Homeobox domain-containing protein.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.	0.669
CDX1	TCF7	ENSAPLP00000031465	ENSAPLP00000032596	Homeobox domain-containing protein.	Transcription factor 7.	0.704
CHCHD7	PLAGL1	ENSAPLP00000029865	ENSAPLP00000006990	Coiled-coil-helix-coiled-coil-helix domain containing 7.	PLAG1 like zinc finger 1.	0.527
EGF	CDX1	ENSAPLP00000011666	ENSAPLP00000031465	Pro-epidermal growth factor; EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6.	Homeobox domain-containing protein.	0.704
EGF	GHSR	ENSAPLP00000011666	ENSAPLP00000011813	Pro-epidermal growth factor; EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6.	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	0.856
EGF	PLAGL1	ENSAPLP00000011666	ENSAPLP00000006990	Pro-epidermal growth factor; EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6.	PLAG1 like zinc finger 1.	0.544
EGF	TCF7	ENSAPLP00000011666	ENSAPLP00000032596	Pro-epidermal growth factor; EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6.	Transcription factor 7.	0.576
EIF2AK3	CDX1	ENSAPLP00000015386	ENSAPLP00000031465	Eukaryotic translation initiation factor 2 alpha kinase 3.	Homeobox domain-containing protein.	0.653
EIF2AK3	PLAGL1	ENSAPLP00000015386	ENSAPLP00000006990	Eukaryotic translation initiation factor 2 alpha kinase 3.	PLAG1 like zinc finger 1.	0.636
EIF2AK3	PLOD1	ENSAPLP00000015386	ENSAPLP00000011167	Eukaryotic translation initiation factor 2 alpha kinase 3.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.	0.598
GHSR	CDX1	ENSAPLP00000011813	ENSAPLP00000031465	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	Homeobox domain-containing protein.	0.548
GHSR	EGF	ENSAPLP00000011813	ENSAPLP00000011666	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	Pro-epidermal growth factor; EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6.	0.856
GHSR	PLAGL1	ENSAPLP00000011813	ENSAPLP00000006990	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	PLAG1 like zinc finger 1.	0.640
GHSR	TCF7	ENSAPLP00000011813	ENSAPLP00000032596	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.	Transcription factor 7.	0.769
HTT	PHACTR2	ENSAPLP00000007536	ENSAPLP00000016986	Huntingtin.	Phosphatase and actin regulator.	0.470
HTT	PLAGL1	ENSAPLP00000007536	ENSAPLP00000006990	Huntingtin.	PLAG1 like zinc finger 1.	0.553