STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGPEP1Pyroglutamyl-peptidase I. (177 aa)    
Predicted Functional Partners:
KXD1
KxDL motif containing 1.
      
 0.748
CRTC1
CREB regulated transcription coactivator 1.
   
  
 0.616
BCDIN3D
BCDIN3 domain containing RNA methyltransferase.
      
 0.611
ILRUN
Inflammation and lipid regulator with UBA-like and NBR1-like domains.
      
 0.611
ELL
Elongation factor for RNA polymerase II.
      
 0.610
ZNF704
Zinc finger protein 704.
      
 0.609
RSRC2
Arginine and serine rich coiled-coil 2.
      
 0.606
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
      
 0.586
SGSM2
Small G protein signaling modulator 2.
      
 0.586
CLUAP1
Clusterin associated protein 1.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.