STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIP7Nucleolar pre-rRNA processing protein NIP7. (149 aa)    
Predicted Functional Partners:
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.993
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.992
WDR12
WD repeat domain 12.
   
 
 0.990
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.988
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.987
RPF2
Ribosome production factor 2 homolog.
   
 
 0.985
RSL24D1
Ribosomal L24 domain containing 1.
   
 
 0.984
RSL1D1
Ribosomal L1 domain containing 1.
   
 
 0.981
DDX18
RNA helicase.
   
 0.980
RPF1
Ribosome production factor 1 homolog.
   
 
 0.978
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.