Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMBRD2LMBR1 domain containing 2. (688 aa)    
Predicted Functional Partners:
CAPSL
Calcyphosine like.
 
 
  
 0.784
TIMM22
Translocase of inner mitochondrial membrane 22.
 
      0.744
PITHD1
PITH domain containing 1.
      
 0.670
FRA10AC1
FRA10A associated CGG repeat 1.
      
 0.670
PIGO
Phosphatidylinositol glycan anchor biosynthesis class O.
      
 0.664
UBAC1
UBA domain containing 1.
      
 0.634
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
   
  
 0.634
FAM214A
Family with sequence similarity 214 member A.
      
 0.602
DNAJC22
DnaJ heat shock protein family (Hsp40) member C22.
      
 0.599
HMG20B
High mobility group 20B.
      
 0.597
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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