Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TAPT1Transmembrane anterior posterior transformation 1. (630 aa)    
Predicted Functional Partners:
SUCO
SUN domain containing ossification factor.
    
 
 0.832
CSTF1
Cleavage stimulation factor subunit 1.
 
      0.781
LAP3
Leucine aminopeptidase 3.
      
 0.712
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
      
 0.644
HAUS3
HAUS augmin like complex subunit 3.
      
 0.632
BOD1L1
Biorientation of chromosomes in cell division 1 like 1.
      
 0.625
DNAAF5
Dynein axonemal assembly factor 5.
      
 0.604
CCDC149
Coiled-coil domain containing 149.
      
 0.602
ZCCHC4
Zinc finger CCHC-type containing 4.
      
 0.601
STIM2
Stromal interaction molecule 2.
      
 0.601
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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