STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAPT1Transmembrane anterior posterior transformation 1. (630 aa)    
Predicted Functional Partners:
LAP3
Leucine aminopeptidase 3.
      
 0.843
CSTF1
Cleavage stimulation factor subunit 1.
 
      0.781
LDB2
LIM domain binding 2.
      
 0.747
CCDC149
Coiled-coil domain containing 149.
      
 0.713
BOD1L1
Biorientation of chromosomes in cell division 1 like 1.
      
 0.713
LCORL
Ligand dependent nuclear receptor corepressor like.
      
 0.668
PHLPP1
PH domain and leucine rich repeat protein phosphatase 1.
      
 0.630
SUCO
SUN domain containing ossification factor.
    
   0.625
ZCCHC4
Zinc finger CCHC-type containing 4.
      
 0.613
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
      
 0.613
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.