STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3IIG3_ANAPPGOLD domain-containing protein. (251 aa)    
Predicted Functional Partners:
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
  
 0.828
U3IJ22_ANAPP
Uncharacterized protein.
      
 0.748
U3I4W6_ANAPP
VWFA domain-containing protein.
      
 0.611
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
      
 0.586
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.555
UFM1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
      
 0.545
TRABD
TraB domain containing.
      
 0.535
TMED10
Transmembrane p24 trafficking protein 10.
   
 
 0.520
QPCT
Glutaminyl-peptide cyclotransferase.
      
 0.510
ENSAPLP00000025521
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
      
 0.510
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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