Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TMEM179BTransmembrane protein 179B. (200 aa)    
Predicted Functional Partners:
YARS1
Tyrosine--tRNA ligase.
  
  
 0.804
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.778
WARS1
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.656
MFSD12
Uncharacterized protein.
     
 0.654
MARS1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.651
SUPT20H
SPT20 homolog, SAGA complex component.
    
 
 0.625
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 
 0.604
KARS1
Lysine--tRNA ligase.
  
 
 0.600
USP22
Ubiquitinyl hydrolase 1.
    
   0.596
RARS2
Arginyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.591
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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