STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CENPVGFA domain-containing protein. (219 aa)    
Predicted Functional Partners:
SORD
Sorbitol dehydrogenase.
   
 
 0.743
CENPQ
Centromere protein Q.
      
 0.738
TKT
Transketolase.
     
  0.737
MEI4
Meiotic double-stranded break formation protein 4.
      
 0.668
ADH5
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.661
ENSAPLP00000029644
PKS_ER domain-containing protein.
    
 0.661
CCDC181
Coiled-coil domain containing 181.
      
 0.559
ENSAPLP00000025190
Uncharacterized protein.
      
 0.559
ERGIC1
Endoplasmic reticulum-golgi intermediate compartment 1.
      
 0.558
RAD1
RAD1 checkpoint DNA exonuclease.
      
 0.485
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.