Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF20E3 ubiquitin protein ligase. (984 aa)    
Predicted Functional Partners:
WAC
WW domain containing adaptor with coiled-coil.
   
 0.947
UBE2B
Ubiquitin conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.945
UBE2A
Ubiquitin conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.945
CDC73
Cell division cycle 73.
   
 0.918
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.916
SETD2
Uncharacterized protein.
   
 
 0.905
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.879
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.847
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.831
USP22
Ubiquitinyl hydrolase 1.
   
 
 0.811
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.