Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC2Leucine rich repeat containing 2. (348 aa)    
Predicted Functional Partners:
RTCA
RNA 3'-terminal phosphate cyclase.
    
 
 0.555
TOGARAM2
TOG array regulator of axonemal microtubules 2.
      
 0.551
ENSAPLP00000020040
LRRCT domain-containing protein.
  
 
  0.543
LUM
Lumican.
  
     0.521
DCN
Decorin; May affect the rate of fibrils formation.
  
     0.515
PRELP
Proline and arginine rich end leucine rich repeat protein.
  
     0.514
CHAD
Uncharacterized protein.
  
    0.504
RCBTB2
RCC1 and BTB domain containing protein 2.
    
 0.503
FMOD
Fibromodulin.
  
     0.500
NRROS
Uncharacterized protein.
  
     0.491
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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