STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MESTMesoderm specific transcript. (234 aa)    
Predicted Functional Partners:
PSEN2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
      
 0.632
C9orf72
C9orf72-SMCR8 complex subunit.
      
 0.632
COPG2
Coatomer protein complex subunit gamma 2.
      
 0.621
PLAGL1
PLAG1 like zinc finger 1.
   
 
 0.614
PI15
Peptidase inhibitor 15; Belongs to the CRISP family.
   
  
 0.591
PALB2
Partner and localizer of BRCA2.
  
 0.580
LRGUK
Uncharacterized protein.
   
 
 0.554
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
    
 
 0.545
SGCE
Sarcoglycan epsilon.
      
 0.532
AASDH
Aminoadipate-semialdehyde dehydrogenase.
    
 0.502
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.