STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF123Ring finger protein 123. (1212 aa)    
Predicted Functional Partners:
USP19
Ubiquitin specific peptidase 19.
   
 0.970
UBAC1
UBA domain containing 1.
   
 
 0.853
MON1A
MON1 homolog A, secretory trafficking associated.
      
 0.748
USP4
Ubiquitin carboxyl-terminal hydrolase.
   
 0.733
CDHR4
Uncharacterized protein.
    
 
 0.638
NDUFAF3
NADH:ubiquinone oxidoreductase complex assembly factor 3.
    
 
 0.627
IP6K1
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.619
ENSAPLP00000025291
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.619
PLPPR4
Phospholipid phosphatase related 4.
   
  
 0.617
ENSAPLP00000019035
Uncharacterized protein.
   
  
 0.616
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.