STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C15orf41Chromosome 15 open reading frame 41. (160 aa)    
Predicted Functional Partners:
C1orf146
Chromosome 1 open reading frame 146.
  
 0.845
GEMIN2
Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.
      
 0.610
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.546
SPATA6
Spermatogenesis associated 6.
   
  
 0.518
CDAN1
Codanin-1_C domain-containing protein.
    
 
 0.515
FASN
Fatty acid synthase.
  
 0.498
ENSAPLP00000018986
PKS_AT domain-containing protein.
  
 0.498
FAM98B
Family with sequence similarity 98 member B.
    
 
 0.490
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
  
 0.482
CHIC2
Cysteine rich hydrophobic domain 2.
      
 0.479
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.