Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SLC1A3Amino acid transporter. (543 aa)    
Predicted Functional Partners:
SLC7A1
Solute carrier family 7 member 1.
   
 
 0.741
SLC7A5
Solute carrier family 7 member 5.
   
 
 0.709
SLC3A1
Solute carrier family 3 member 1.
   
 
 0.666
SLC15A1
Solute carrier family 15 member 1.
   
 
 0.659
GJA1
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
     
 0.645
CLTRN
Collectrin domain-containing protein.
      
 0.598
SLC7A10
Solute carrier family 7 member 10.
   
 
 0.597
HMGCR
3-hydroxy-3-methylglutaryl coenzyme A reductase.
     
 0.586
SLC38A4
Solute carrier family 38 member 4.
      
 0.582
GSTO1
Glutathione S-transferase omega 1.
      
 0.581
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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