Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FMODFibromodulin. (380 aa)    
Predicted Functional Partners:
FIBIN
Fin bud initiation factor homolog.
   
    0.959
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.936
TGFB3
Transforming growth factor beta 3.
   
 0.936
ACAN
Aggrecan.
    
 0.841
OGN
Osteoglycin.
   
 
 0.768
PRELP
Proline and arginine rich end leucine rich repeat protein.
   
 
  0.676
ASPN
Asporin.
  
 
0.674
LUM
Lumican.
   
 
 0.656
ENSAPLP00000021683
Uncharacterized protein.
      
 0.634
OMD
Osteomodulin.
   
 
 0.612
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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