IQCH protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

IQCH

IQ motif containing H. (975 aa)

Predicted Functional Partners:

FEM1B

0.668

C15orf61

0.527

UQCRFS1

0.518

SDHA

0.427

SDHB

0.409

PALB2

0.407

IMMT

0.406

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C15orf61	IQCH	ENSAPLP00000000489	ENSAPLP00000007224	Chromosome 15 open reading frame 61.	IQ motif containing H.	0.527
FEM1B	IQCH	ENSAPLP00000003064	ENSAPLP00000007224	Fem-1 homolog B.	IQ motif containing H.	0.668
IMMT	IQCH	ENSAPLP00000007883	ENSAPLP00000007224	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	IQ motif containing H.	0.406
IMMT	PALB2	ENSAPLP00000007883	ENSAPLP00000023524	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Partner and localizer of BRCA2.	0.415
IMMT	SDHA	ENSAPLP00000007883	ENSAPLP00000006678	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.613
IMMT	SDHB	ENSAPLP00000007883	ENSAPLP00000014900	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Succinate dehydrogenase complex iron sulfur subunit B.	0.716
IMMT	UQCRFS1	ENSAPLP00000007883	ENSAPLP00000001698	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.765
IQCH	C15orf61	ENSAPLP00000007224	ENSAPLP00000000489	IQ motif containing H.	Chromosome 15 open reading frame 61.	0.527
IQCH	FEM1B	ENSAPLP00000007224	ENSAPLP00000003064	IQ motif containing H.	Fem-1 homolog B.	0.668
IQCH	IMMT	ENSAPLP00000007224	ENSAPLP00000007883	IQ motif containing H.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.406
IQCH	PALB2	ENSAPLP00000007224	ENSAPLP00000023524	IQ motif containing H.	Partner and localizer of BRCA2.	0.407
IQCH	SDHA	ENSAPLP00000007224	ENSAPLP00000006678	IQ motif containing H.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.427
IQCH	SDHB	ENSAPLP00000007224	ENSAPLP00000014900	IQ motif containing H.	Succinate dehydrogenase complex iron sulfur subunit B.	0.409
IQCH	UQCRFS1	ENSAPLP00000007224	ENSAPLP00000001698	IQ motif containing H.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.518
PALB2	IMMT	ENSAPLP00000023524	ENSAPLP00000007883	Partner and localizer of BRCA2.	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.415
PALB2	IQCH	ENSAPLP00000023524	ENSAPLP00000007224	Partner and localizer of BRCA2.	IQ motif containing H.	0.407
PALB2	SDHA	ENSAPLP00000023524	ENSAPLP00000006678	Partner and localizer of BRCA2.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.765
PALB2	SDHB	ENSAPLP00000023524	ENSAPLP00000014900	Partner and localizer of BRCA2.	Succinate dehydrogenase complex iron sulfur subunit B.	0.860
PALB2	UQCRFS1	ENSAPLP00000023524	ENSAPLP00000001698	Partner and localizer of BRCA2.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.948
SDHA	IMMT	ENSAPLP00000006678	ENSAPLP00000007883	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.	0.613