STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB2LIM domain binding 2. (362 aa)    
Predicted Functional Partners:
TAL2
TAL bHLH transcription factor 2.
    
 0.874
LMO2
LIM domain only 2.
    
 0.852
LMO3
LIM domain only 3.
    
 0.828
LMO1
LIM domain only 1.
    
 0.828
TAPT1
Transmembrane anterior posterior transformation 1.
      
 0.747
SSBP2
Single stranded DNA binding protein 2.
   
 
 0.703
SSBP3
Single stranded DNA binding protein 3.
   
 
 0.703
LHX2
LIM homeobox 2.
    
 0.699
LHX9
LIM homeobox 9.
    
 0.699
ISL1
ISL LIM homeobox 1.
    
 0.672
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.