Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR12WD repeat domain 12. (360 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.999
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.991
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.991
EBNA1BP2
EBNA1 binding protein 2.
   
 0.989
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
 
 0.988
DDX18
RNA helicase.
   
 0.987
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 0.983
GNL3
G protein nucleolar 3.
   
 0.982
RPF2
Ribosome production factor 2 homolog.
   
 
 0.982
CEP152
Centrosomal protein 152.
   
 0.981
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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