STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC1ATP binding cassette subfamily C member 1. (1518 aa)    
Predicted Functional Partners:
U3I418_ANAPP
ABC transporter domain-containing protein.
   
 0.817
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.611
BMERB1
BMERB domain containing 1.
      
 0.548
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.498
ABCB1
Uncharacterized protein.
   
0.473
USP10
Ubiquitin carboxyl-terminal hydrolase.
    
  0.470
HMGB1
High mobility group box 1.
   
  
 0.451
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.449
ABCG4
ATP binding cassette subfamily G member 4.
   
 0.434
U3IRM5_ANAPP
Uncharacterized protein.
      
 0.429
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.