ARHGAP12 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ARHGAP12

Rho GTPase activating protein 12. (878 aa)

Predicted Functional Partners:

ZBTB25

0.646

RNF182

0.617

TBC1D30

0.611

AMDHD2

0.611

HAUS8

0.602

KIF13A

0.586

LHFPL2

0.586

MYO9B

0.578

MYO9A

0.578

NRIP3

0.545

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMDHD2	ARHGAP12	ENSAPLP00000026163	ENSAPLP00000007332	Uncharacterized protein.	Rho GTPase activating protein 12.	0.611
AMDHD2	ZBTB25	ENSAPLP00000026163	ENSAPLP00000022271	Uncharacterized protein.	Zinc finger and BTB domain containing 25.	0.747
ARHGAP12	AMDHD2	ENSAPLP00000007332	ENSAPLP00000026163	Rho GTPase activating protein 12.	Uncharacterized protein.	0.611
ARHGAP12	HAUS8	ENSAPLP00000007332	ENSAPLP00000012755	Rho GTPase activating protein 12.	HAUS augmin like complex subunit 8.	0.602
ARHGAP12	KIF13A	ENSAPLP00000007332	ENSAPLP00000004986	Rho GTPase activating protein 12.	Kinesin family member 13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.586
ARHGAP12	LHFPL2	ENSAPLP00000007332	ENSAPLP00000021464	Rho GTPase activating protein 12.	LHFPL tetraspan subfamily member 2.	0.586
ARHGAP12	MYO9A	ENSAPLP00000007332	ENSAPLP00000017810	Rho GTPase activating protein 12.	Myosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.578
ARHGAP12	MYO9B	ENSAPLP00000007332	ENSAPLP00000013016	Rho GTPase activating protein 12.	Myosin IXB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.578
ARHGAP12	NRIP3	ENSAPLP00000007332	ENSAPLP00000002811	Rho GTPase activating protein 12.	Nuclear receptor interacting protein 3.	0.545
ARHGAP12	RNF182	ENSAPLP00000007332	ENSAPLP00000000923	Rho GTPase activating protein 12.	Ring finger protein 182.	0.617
ARHGAP12	TBC1D30	ENSAPLP00000007332	ENSAPLP00000017682	Rho GTPase activating protein 12.	TBC1 domain family member 30.	0.611
ARHGAP12	ZBTB25	ENSAPLP00000007332	ENSAPLP00000022271	Rho GTPase activating protein 12.	Zinc finger and BTB domain containing 25.	0.646
HAUS8	ARHGAP12	ENSAPLP00000012755	ENSAPLP00000007332	HAUS augmin like complex subunit 8.	Rho GTPase activating protein 12.	0.602
HAUS8	KIF13A	ENSAPLP00000012755	ENSAPLP00000004986	HAUS augmin like complex subunit 8.	Kinesin family member 13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.611
KIF13A	ARHGAP12	ENSAPLP00000004986	ENSAPLP00000007332	Kinesin family member 13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Rho GTPase activating protein 12.	0.586
KIF13A	HAUS8	ENSAPLP00000004986	ENSAPLP00000012755	Kinesin family member 13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	HAUS augmin like complex subunit 8.	0.611
LHFPL2	ARHGAP12	ENSAPLP00000021464	ENSAPLP00000007332	LHFPL tetraspan subfamily member 2.	Rho GTPase activating protein 12.	0.586
LHFPL2	NRIP3	ENSAPLP00000021464	ENSAPLP00000002811	LHFPL tetraspan subfamily member 2.	Nuclear receptor interacting protein 3.	0.558
LHFPL2	RNF182	ENSAPLP00000021464	ENSAPLP00000000923	LHFPL tetraspan subfamily member 2.	Ring finger protein 182.	0.610
LHFPL2	TBC1D30	ENSAPLP00000021464	ENSAPLP00000017682	LHFPL tetraspan subfamily member 2.	TBC1 domain family member 30.	0.611